Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922559.1_cds_XP_016471326.1_63680
CDS Infomation

[gene=LOC107793466] [db_xref=GeneID:107793466] [protein=valine--tRNA ligase, mitochondrial 1-like isoform X2] [protein_id=XP_016471326.1] [location=join(196149..196151,196241..196291,196376..196450,197028..197087,197352..197515,197637..197709,199636..199701,199776..199859,199978..200055,200335..200418,200530..200609,200765..200822,200910..201212,201295..201477)] [gbkey=CDS]
Sequence

ATGGCTGACTCGTCGGGTAAATCACAAGAGACTGTGAAAAATTGTAAAACGGAGGCGGCG
GCGGCAGCATCAGACGGAAAGGAATTAACCCCAGAAGAGCTCGAAAAGAAAAAGAAAAAA
GAAGAAAAGGCTAGAGAGAAAGAGTTGAAAAAACTCAAGGCCGCCCAAAAAGCGGAAGCA
GCAAAAAAGGGCGCCTCCAATGTGTCAAAGGCTGCTAAGAAGAAGAGCTCAAAAAGGGAA
GGTGAAGAGGAAAACCCTGAGGATTATGTTGATCCAGAAACACCTCTGGGGGAGAAGAAG
AGGCTCTCCCGTCAAATGGCAAAGACTTTTAATCCCAGTGCTGTAGAGAAATCGTGGTAT
TCTTGGTGGGAGAAGTCCAATTTCTTCGTTGCAGACCCGAACAGCTCTAAACCACCTTTT
GTGATTGTCTTGCCCCCACCAAATGTGACTGGTGCTCTCCATATCGGACATGCACTCACT
GCTGCCATCGAGGATACAATTATTCGTTGGCGGAGAATGTCCGGATACAATACCTTGTGG
GTGCCAGGGATGGATCATGCTGGGATCGCAACACAGGTTGTTGTGGAGAAGAAGATTATG
CGGGAGAGGAATTTGACTAGACATGATATTGGGCGTGAGAACTTTGTATCTGAAGTCTGG
AACTGGAAGAATGAGTATGGGGGTACTATACTGCAGCAATTACGTCGCTTGGGTGCGTCA
CTTGATTGGTCTCGCGAGTGCTTTACCATGGATGAGAAAAGGTCTAAAGCTGTTACTGAA
GCATTTGTGAGACTGTCCAATGAAGGTCTTATATACAGGGCTCCACGTATGGTGCATTGG
GATTGTGTCTTGCGTACTGCAATATCTGATATTGAGGTCGAATATACAGATATCAAAGAG
AGGACACTTCTGAGTGTTCCTGGATATGAGGAGCCTGTGGAGTTCGGGGTGCTGACATCA
TTTGCTTACCCCTTGGAAGGTGGCCTTGGTGAAATTGTTGTGGCGACTACCAGAATTGAA
ACAATGCTTGGTGATACTGCAATTGCTATACATCCTGAAGACAAAAGATACAGTCACCTT
CATGGGAGATTTGCTATTCATCCATTCAATGGACGAAGGCTTCCAATAGTTTGTGATGAA
ATACTTGTAGATATGAATTTTGGGACTGGTGCTGTTAAGATAACTCCAGCCCATGATCCA
AATGATTTCGAGGTTGGACAGCGTCACAAGCTTGAATTCATAAGCATTTTTACTGATGAT
GGGAATATAAATAGTAATGCGGGCCCATACTTTGAAGGAATGCCTCGTTTCAAAGCTCGT
GTCGCTGTGACTGAAGCTTTAAAGGAAAAGGTATCTTCATAA

Peptide Sequence

PEP ID

XP_016471326.1
PEP Infomation

PREDICTED: valine--tRNA ligase, mitochondrial 1-like isoform X2 [Nicotiana tabacum]
Sequence

MADSSGKSQETVKNCKTEAAAAASDGKELTPEELEKKKKKEEKAREKELKKLKAAQKAEA
AKKGASNVSKAAKKKSSKREGEEENPEDYVDPETPLGEKKRLSRQMAKTFNPSAVEKSWY
SWWEKSNFFVADPNSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTIIRWRRMSGYNTLW
VPGMDHAGIATQVVVEKKIMRERNLTRHDIGRENFVSEVWNWKNEYGGTILQQLRRLGAS
LDWSRECFTMDEKRSKAVTEAFVRLSNEGLIYRAPRMVHWDCVLRTAISDIEVEYTDIKE
RTLLSVPGYEEPVEFGVLTSFAYPLEGGLGEIVVATTRIETMLGDTAIAIHPEDKRYSHL
HGRFAIHPFNGRRLPIVCDEILVDMNFGTGAVKITPAHDPNDFEVGQRHKLEFISIFTDD
GNINSNAGPYFEGMPRFKARVAVTEALKEKVSS

Transcript Sequence

Gene sequence data has not been registered.